Lee, Y., Lee, N., Jeong, Y., Hwang, S., Kim, W., Cho, S., Palsson, B., Cho, B.K. (2019) The transcription unit architecture of Streptomyces lividans TK24,Frontiers in Microbiology, 10, 2074.


Kang, M.*, Kim, K.*, Choe, D., Cho, S., Kim, S.C., Palsson, B., Cho, B.K. (2019) Inactivation of a Mismatch-Repair System Diversifies Genotypic Landscape of Escherichia coli during Adaptive Laboratory Evolution,Frontiers in Microbiology, 10, 1845.


Choe, D.*, Lee, J.H.*, Yoo, M., Hwang, S., Sung, B.H., Cho, S., Palsson, B., Kim, S.C., Cho, B.K. (2019) Adaptive laboratory evolution of a genome-reduced Escherichia coli, Nature Communications, 10, 935.


Hwang, S., Lee, N., Jeong, Y., Lee, Y., Kim, W., Cho, S., Palsson, B., Cho, B.K. (2019) Primary transcriptome analysis determines transcriptional and translational regulatory elements encoded in the Streptomyces genomes, Nucleic Acids Research, gkz471,.


Shin, J., Song, Y., Jin, S., Lee, J.K., Kim, D.R., Kim, S.C., Cho, S., Cho, B.K.(2018) Genome-scale analysis of Acetobacterium bakii reveals the cold adaptation of psychrotolerant acetogens by post-transcriptional regulation, RNA, Published in Advance September 24, 2018.


Shin, J*., Lee, S*., Go, M.J., Lee, S.Y., Kim, S.C., Lee, C.H., and Cho, B.K.  (2016) Analysis of the mouse gut microbiome using full-length 16S rRNA amplicon sequencing, Scientific Reports, 6:29681.


Jeong, Y*., Kim, J.N*., Kim, M.W., Bucca, G., Cho, S., Yoon, Y.J., Kim, B.K., Roe, J.H., Kim, S.C., Smith, C.P., and Cho, B.K. (2016) The Dynamic Transcriptional and Translational Landscape of the Model Antibiotic Producer Streptomyces coelicolor A3(2), Nat. commun., 7:11605


Cho, Y.B., Lee, E.J., Cho, S. and Cho, B.K. (2016) Functional elucidation of the non-coding RNAs of Kluyveromyces marxianus in the exponential growth phase, BMC Genomics, 17(1), 154


Lee, N*., Shin, J*., Park, J., Lee, G.M., Cho, S. and Cho, B.K. (2016) Targeted gene deletion using DNA-free RNA-guided Cas9 nuclease accelerates adaptation of CHO cells to suspension culture, ACS Synthetic Biology,  Online publication, February 08, 2016


Hwang, S., Song, Y., and Cho, B.K.* (2015) Draft Genome Sequence of Acetobacterium bakii DSM 8293, a Potential Psychrophilic Chemical Producer through Syngas Fermentation. Genome Announc. no. 5 e01070-15


Shin, H., Hong, S.J., Kim. H., Yoo C., Lee, H., Choi, H.K., Lee, C.G. and Cho, B.K.* (2015) Elucidation of the growth delimitation of Dunaliella tertiolecta under nitrogen stress by integrating transcriptome and peptidome analysis. Bioresource Technol. 194 (2015) 57-66


Song, Y., Lee, B.R., Cho, S., Cho, Y.B., Kim, S.W., Kang, T.J., Kim, S.C., and Cho, B.K. (2015) Determination of Single Nucleotide Variants in Escherichia coli DH5 alpha by using Short-read Sequencing. published online 1 May 2015.


Cho, S., Cho, Y.B., Kang, T.J., Kim, S.C., Palsson, B., and Cho, B.K. (2015) The architecture of ArgR-DNA complexes at the genome-scale in Escherichia coli. Nucleic Acids Res., 43(6):3079–3088 


Song, Y., Hwang, S., and Cho, B.K. (2015) Draft genome sequence of Clostridium aceticum DSM 1496, a potential butanol producer through syngas fermentation. Genome Announc.,Mar-Apr; 3(2): e00258-15.


Cho, S., Cho, Y.B., Kang, T.J., Kim, S.C., Palsson, B., and Cho, B.K. (2015) The architecture of ArgR-DNA complexes at the genome-scale in Escherichia coli. Nucleic Acids Res., 43(6):3079–3088 


Song, Y. and Cho, B.K. (2015) Draft genome sequence of the chemolithoautotrophic acetogenic butanol-producing Eubacterium limosum ATCC 8486. Genome Announc., 3(1) e01564-14


Shin, H.S., Cho, Y., Choe. D., Jeong, Y.J., Cho, S., Kim, S.C., and Cho, B.K. (2014) Exploring the functional residues in a Flavin-binding fluorescent protein using deep mutational scanning. PLoS One, 9(6): e97817


Jeong, Y., Song, Y., Shin, H., and Cho, B.K. (2014) Draft genome sequence of an acid-tolerant Clostridium drakei SL1T, a potential chemical producer through syngas fermentation. Genome Announc., 2(3):e00387-14.


Song, Y., Jeong, Y., Shin, H., and Cho, B.K. (2014) Draft genome sequence of Clostridium scatologenes ATCC25775, a chemolithoautotrophic acetogenic bacterium producing 3-methylindole and 4-methylphenol. Genome Announc., 2(3):e00459-14.